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Table 1 Primers and probes used to detect SARS-CoV-2

From: SARS-CoV-2 analysis on environmental surfaces collected in an intensive care unit: keeping Ernest Shackleton’s spirit

Design

Position

Name

Sequence (5′-3′)

Gen

In house

Sense primer

CoV-2-OVI-S

ATCAAGTTAATGGTTACCCTAACATGT

 
 

Antisense primer

CoV-2-OVI-A

AACCTAGCTGTAAAGGTAAATTGGTACC

ORF1ab

 

Probe MGB FAM

CoV-2-OVI-FAM

CCGCGAAGAAGCTA

 

CDC1

Sense primer

2019-nCoV_N1-F

GACCCCAAAATCAGCGAAAT

 
 

Antisense primer

2019-nCoV_N1-R

TCTGGTTACTGCCAGTTGAATCTG

Gen N

 

Probe MGB VIC

2019-nCoV_N1-P-VIC

CCGCATTACGTTTGGT2

 
  1. 1[8]
  2. 2Probe sequence has been shortened as it is a MGB probe